DigitalKoans

Sunny Yoon, Digital Resources Coordinator at the City University of New York, posted a query on the CODE4LIB list about the use of e-journal publishing software and its integration into institutional repositories.

She has now posted an interesting summary of responses to her query.

You can also read the replies that were posted to the list under the heading "e-journal publishing software."

The Association of Research Libraries has published Research Library Publishing Services: New Options for University Publishing by Karla L. Hahn.

Here's an excerpt from the "Executive Summary":

To foster a deeper understanding of an emerging research library role as publishing service provider, in late 2007 the Association of Research Libraries surveyed its membership to gather data on the publishing services they were providing. Following the survey, publishing program managers at ten institutions participated in semi-structured interviews to delve more deeply into several aspects of service development: the sources and motivations for service launch, the range of publishing services, and relationships with partners.

The survey verified that research libraries are rapidly developing publishing services. By late 2007, 44% of the 80 responding ARL member libraries reported they were delivering publishing services and another 21% were in the process of planning publishing service development. Only 36% of responding institutions were not active in this arena.

These libraries are publishing many kinds of works, but the main focus is journals; 88% of publishing libraries reported publishing journals compared to 79% who publish conference papers and proceedings, and 71% who publish monographs. Established journal titles dominate this emerging publishing sector and are the main drivers of service development, although new titles are also being produced. Although the numbers of titles reported represent a very thin slice of the scholarly publishing pie, the survey respondents work with 265 titles: 131 are established titles, 81 are new titles, and 53 were under development at the time of the survey. On average, these libraries work with 7 or 8 titles with 6 currently available. . . .

Peer reviewed works dominate library publishing programs and editors or acquisitions committees typically maintain their traditional roles in identifying quality content. Libraries often provide technical support for streamlined peer review workflows, but they are not providing peer review itself. The manuscript handling services provided by some publishing programs were a significant attraction to the editors of established publications.

Library publishing program managers report substantial demand for hosting services. Libraries increasingly are positioned to provide at least basic hosting services. Open source software such as the Public Knowledge Project’s Open Journal Systems and DPubs along with new commercial services such as those offered by The Berkeley Electronic Press (bepress) through Digital Commons allows libraries to support basic journal hosting relatively easily.

Advice and consulting regarding a variety of publishing practices and decisions are perhaps even more popular services. There are pressing demands for information and advice about issues such as moving print publications into electronic publishing, discontinuing print in favor of electronic alternatives, publishing works with limited revenue-generating capability, revenue generation, standards of various sorts, markup and encoding, metadata generation, preservation, contracting with service providers, and copyright management.

The Public Library of Science (PLoS) has released Topaz 0.8.2.1, an open source digital publishing system that is used to support several PLoS publications.

Read more about it at "Topaz Release Candidate 0.8.2.1."

Presentations from the Open Access Collections workshop are now available.

Here are selected presentations:

• The Institutional/Disciplinary Divide, a Barrier to Open Access
• Managing Copyright for Open Access
• The Open Access Repository—A Researcher's Tool
• The Public Knowledge Project: Building Open Access Communities with Open Source Software
• Some Experience with Digital Publishing, Open Access Repositories, Research Impact & Quality

According to "Biomedical Digital Libraries Moves to Open Journal Systems," Biomedical Digital Libraries will no longer be published by BioMed Central because "BMC's author payment model had become untenable for most of the authors wishing to publish in the journal." In the future, the journal will be published using Public Knowledge Project's Open Journal Systems without author fees.

BioMed Central has an article-processing charges waiver policy with case-by-case basis review, and it also offers a variety of article-processing charges discounts. It is not clear why these cost-reduction mechanisms did not meet author needs.

Roman Chyla has developed E-Journal, an e-journal management and publishing system based upon the popular open-source Drupal content management system.

Here is a description from the E-Journal site:

This module allows you to create and control own electronic journals in Drupal—you can set up as many journals as you want, add authors and editors. Module gives you issue management and provides list of vocabularies (to browse) and archive of published articles. This module is more sophisticated than epublish.module and was inspired by Open Journal System. Our workflow is not so rigid though and because of the Drupal platform, you can do much more with e-journal than with OJS - potentially ;-).

An example journal that uses E-Journal is Ikaros .

(Prior postings about e-journal management and publishing systems.)

PLoS is building its innovative PLoS ONE e-journal, which will incorporate both traditional and open peer review, using the open source TOPAZ software. (For a detailed description of the PLoS ONE peer review process, check out "ONE for All: The Next Step for PLoS.")

What is TOPAZ? It’s Web site doesn’t provide specifics, but "PLoS ONE—Technical Background" by Richard Cave does:

The core of TOPAZ is a digital information repository called Fedora (Flexible Extensible Digital Object Repository Architecture). Fedora is an Open Source content management application that supports the creation and management of digital objects. The digital objects contain metadata to express internal and external relationships in the repository, like articles in a journal or the text, images and video of an article. This relationship metadata can also be search using a semantic web query languages. Fedora is jointly developed by Cornell University’s computer science department and the University of Virginia Libraries.

The metastore Kowari will be used with Fedora to support Resource Description Framework (RDF) http://en.wikipedia.org/wiki/Resource_Description_Framework metadata within the repository.

The PLoS ONE web interface will be built with AJAX. Client-side APIs will create the community features (e.g. annotations, discussion threads, ratings, etc.) for the website. As more new features are available on the TOPAZ architecture, we will launch them on PLoS ONE.

There was a TOPAZ Wiki at PLoS. It’s gone, but it’s pages are still cached by Google. The Wiki suggests that TOPAZ is likely to support Atom/RSS feeds, full-text search, and OAI-PMH among other possible features.

For information about other open source e-journal publishing systems, see "Open Source Software for Publishing E-Journals."

Want to publish an open access journal, but you don’t want to license a commercial journal management system, develop your own system, or to do it all by tedious HTML hand-coding? Here’s summary information about two existing open source e-journal management systems (and one emerging system) that may do the trick.

HyperJournal

• "HyperJournal is a software application that facilitates the administration of academic journals on the Web. Conceived for researchers in the Humanities and designed according to an intuitive and elegant layout, it permits the installation, personalization, and administration of a dedicated Web site at extremely low cost and without the need for special IT-competence. HyperJournal can be used not only to establish an online version of an existing paper periodical, but also to create an entirely new, solely electronic journal."
• Overview
• Documentation
• Download

Open Journal Systems, Public Knowledge Project

• "Open Journal Systems (OJS) is a journal management and publishing system that has been developed by the Public Knowledge Project through its federally funded efforts to expand and improve access to research. OJS assists with every stage of the refereed publishing process, from submissions through to online publication and indexing. Through its management systems, its finely grained indexing of research, and the context it provides for research, OJS seeks to improve both the scholarly and public quality of referred research."
• Open Journal Systems (Overview)
• FAQ
• OJS Technical Reference
• Download

DPubS (Digital Publishing System), Cornell University Library (In development)

• "DPubS’ ground-breaking software system will enable publishers to cost-effectively organize, deliver, present and publish scholarly journals, monographs, conference proceedings, and other common and evolving means of academic discourse."
• About DPubS
• FAQ

Postscript: Peter Suber suggests adding several other software packages, including:

1. ePublishing Toolkit
2. SciX Open Publishing Services (SOPS)